Re: [aroma.affymetrix] na31 x na33

2014-01-20 Thread Fernando Andrade
thanks for your help! 2014/1/18 Henrik Bengtsson > Hi, > > I'm not sure which chip type you're working on, but if it is > GenomeWideSNP_6, I've just made the na33 (hg19, dbSNP 137) UGP and UFL > annotation data files available: > > http://aroma-project.org/chipTypes/GenomeWideSNP_6 > > The scri

Re: [aroma.affymetrix] na31 x na33

2014-01-18 Thread Henrik Bengtsson
Hi, I'm not sure which chip type you're working on, but if it is GenomeWideSNP_6, I've just made the na33 (hg19, dbSNP 137) UGP and UFL annotation data files available: http://aroma-project.org/chipTypes/GenomeWideSNP_6 The script used to build these files are: https://r-forge.r-project.org/scm

[aroma.affymetrix] na31 x na33

2014-01-16 Thread Fernando Andrade
Hello, I've just downloaded the csv version na33 from affymetrix, and in the CRMAv2 method it says I need ufl and ugp files, but they are based on the na31 version. Do you know where to find or how can I build these files from version na33. Thanks for the attention -- -- When reporting probl