I downloaded the two non-official CDFs
* HTA-2_0.r1.exon.cdf
* HTA-2_0.r1.gene.cdf
from
http://www.affymetrix.com/support/technical/byproduct.affx?product=human_transcriptome.
I then renamed them to use commas instead of periods for the "tags".
When I inspect them I see that they report an array
Hi Henrik,
Please see below:
> sessionInfo()
R version 3.0.2 (2013-09-25)
Platform: x86_64-apple-darwin10.8.0 (64-bit)
locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods
base
This looks all correct to me. What is your sessionInfo() after
receiving this error?
/Henrik
On Wed, Oct 15, 2014 at 4:19 AM, sanjana wrote:
> Hi,
>
> I am using a Custom cdf file HTA-2_0,Transcript,binary.cdf in aroma.
> affymetrix to analyse HTA-2_0 chip . I am using the following commands
Hi,
I am using a Custom cdf file *HTA-2_0,Transcript,binary.cdf* in aroma.
affymetrix to analyse HTA-2_0 chip . I am using the following commands to
set up CDF and CEL files.
>chipType <- "HTA-2_0"
>cdf <- AffymetrixCdfFile$byChipType(chipType, tags="Transcript,binary")
>print(cdf)
Affymetri
