Re: [Artemis-users] Problems viewing VCF files

2012-03-19 Thread Tim Carver
Hi Louis You need to read in the bgzip'ed vcf file not the tabix index file. It is expecting a file to be loaded with the suffix .vcf.gz rather than .tbi. It will then automatically look for the index (.tbi) file in the same directory as the VCF file. Regards Tim On 3/17/12 2:48 PM, Louis

[Artemis-users] Java web start with Artemis

2012-03-19 Thread PIRA (Preethi Ramaiya)
Hi I would like to be able to serve up genomes with BAM files as shown in http://www.sanger.ac.uk/resources/software/artemis/ngs/. It is very handy for our end-users to be able to visualize the a NGS alignments in a familiar tool. Is there a how to set up artemis with Webstart and bam files