Re: [base] tab2mage exporter question

2007-10-17 Thread Dominic Oyeniran
Hi Micha, Micha Bayer wrote: Hi Dominic, We are trying to export our first experiment for real so we can submit it to ArrayExpress, and initially it looked like everything had worked okay. But now we have found an error with the annotation that I wanted to ask you about. Our experiment

Re: [base] tab2mage exporter question

2007-10-17 Thread Nicklas Nordborg
Dominic Oyeniran wrote: Hi Micha, Micha Bayer wrote: Hi Dominic, We are trying to export our first experiment for real so we can submit it to ArrayExpress, and initially it looked like everything had worked okay. But now we have found an error with the annotation that I wanted to ask you

Re: [base] tab2mage exporter question

2007-10-17 Thread Dominic Oyeniran
Nicklas Nordborg wrote: Dominic Oyeniran wrote: Hi Micha, Micha Bayer wrote: Hi Dominic, We are trying to export our first experiment for real so we can submit it to ArrayExpress, and initially it looked like everything had worked okay. But now we have found an error with the annotation

Re: [base] Problems running Tab2Mage Importer, NOT sufficient Disk Space

2007-10-17 Thread Dominic Oyeniran
I had this problem too, but had not yet got round to figuring out the solution. It is very helpful to read the README.TXT file on the BasePlugins download page before using the tab2mage importer plugin to avoid any issues /problems. The direct link to the file as stated in the last email

Re: [base] Problems running Tab2Mage Importer, NOT sufficient Disk Space

2007-10-17 Thread Dominic Oyeniran
And it is also linked from http://lev.thep.lu.se/trac/baseplugins/wiki/uk.ac.ebi.Tab2MageImporter But the readme file is not very precise about this problem, it advices me not to use root. I disregarded that advice :(. If it will only run as a non-root user with a limited quota, that should

[base] BASE 2.4.4 released. Please read, important performance issue fixed in this release.

2007-10-17 Thread Bob MacCallum
That is excellent news. I was thinking that the root bioassay set creation was rather too slow for a simple subtraction that takes no time in BASE1. many thanks, Bob. Jari Häkkinen writes: We are happy to announce the release of BASE 2.4.4. As always you can find the latest release at

Re: [base] Problems running Tab2Mage Importer, NOT sufficient Disk Space

2007-10-17 Thread Jari Häkkinen
Just for your information: Dominic Oyeniran wrote: This is a known issue and has been documented here: http://lev.thep.lu.se/trac/baseplugins/browser/trunk/uk/ac/ebi/Tab2MageImporter/README.txt. Please scroll to the usage section right after the installation section. We prefer to use links