Hi Lavinia, I apologize the delayed response but I needed to check whether we anticipate this need for our own purposes. The good news is that our lab will be interested in getting methylation array support into BASE, the bad news is that we have no real time line for BASE methylation adaptation yet.
In short, BASE cannot do methylation specific analysis today. We will add support on some level that needs to be defined. You can, as we do, store your methylation arrays in BASE down to the raw bioassay level. When we finally get, our someone contributes, methylation support into BASE you will be ready to go. For methylation data we currently just want to keep track of data produced at our university service facility and we also deliver data to the facility users through BASE. I have added methylation support to the wish list, http://baseplugins.thep.lu.se/ticket/196 Cheers, Jari Lavinia Gordon wrote: > Dear all > > Is BASE capable of analysing Illumina HumanMethylation27 DNA Analysis > BeadChip data? > > with thanks for your time, > > Lavinia Gordon. > > > ------------------------------------------------------- > Bioinformatics Department > Rm SW916, 9th Floor > Murdoch Children's Research Institute > Royal Children's Hospital > Flemington Road, Parkville > Victoria 3052 > Australia > Tel: (+613) 8341 6221 > ------------------------------------------------------- > > > ------------------------------------------------------------------------------ > Apps built with the Adobe(R) Flex(R) framework and Flex Builder(TM) are > powering Web 2.0 with engaging, cross-platform capabilities. Quickly and > easily build your RIAs with Flex Builder, the Eclipse(TM)based development > software that enables intelligent coding and step-through debugging. > Download the free 60 day trial. http://p.sf.net/sfu/www-adobe-com > _______________________________________________ > The BASE general discussion mailing list > basedb-users@lists.sourceforge.net > unsubscribe: send a mail with subject "unsubscribe" to > basedb-users-requ...@lists.sourceforge.net ------------------------------------------------------------------------------ _______________________________________________ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject "unsubscribe" to basedb-users-requ...@lists.sourceforge.net
