Re: [base] Affymetrix Power Tools Error

2009-03-04 Thread Jari Häkkinen
Hi, The problem seems to be in the apt-probeset-summarize program as you point out. Have you tried to run the same analysis outside of BASE? What is the outcome of that? Cheers, Jari philipp-1.kai...@novartis.com wrote: Hi, I am trying to get BASE 2.9.2 working with the APT 0.2 plugin

Re: [base] Affymetrix Power Tools Error

2009-03-04 Thread Jari Häkkinen
Subject Re: [base] Affymetrix Power Tools Error Hi, The problem seems to be in the apt-probeset-summarize program as you point out. Have you tried to run the same analysis outside of BASE? What is the outcome of that? Cheers, Jari philipp-1.kai...@novartis.com wrote