Memory problem solved. Thanks to those of you who provided thoughtful
suggestions on and off the list. The problem was a simple typo in the
catalina.sh file.
Kind Regards,
matthew
On Dec 5, 2007 3:21 PM, matthew lange <[EMAIL PROTECTED]> wrote:
> Sorry forgot to add what you asked for, here
a:595)
>
>
>
> On Dec 3, 2007 11:02 PM , *Nicklas Nordborg* <[EMAIL PROTECTED]
> <mailto:[EMAIL PROTECTED]>> wrote:
>
>
>
> -- Forwarded message ------
> From: *Nicklas Nordborg* <[EMAIL PROTECTED]
> <mailto:[EMAIL PROTECTED]
Thread.run(Thread.java:595)
On Dec 3, 2007 11:02 PM , Nicklas Nordborg <[EMAIL PROTECTED]> wrote:
>
>
> -- Forwarded message --
> From: Nicklas Nordborg <[EMAIL PROTECTED]>
> Date: Dec 3, 2007 11:02 PM
> Subject: Re: [base] Java memory error
> To: B
ent: 03 December 2007 22:16
> To: basedb-users@lists.sourceforge.net
> Cc: 'Joseph Fass'; [EMAIL PROTECTED]
> Subject: [base] Java memory error
>
> I am using the latest Base, and trying to load an initial data set.
My
> initial effort was to modify the reporter importer t
Matthew Lange wrote:
> I am using the latest Base, and trying to load an initial data set. My
> initial effort was to modify the reporter importer to load some affy
Why have you modified the reporter importer? What modifications have you
made? The regular reporter importer can import Affymetri
I am using the latest Base, and trying to load an initial data set. My
initial effort was to modify the reporter importer to load some affy probes
from a csv file. This worked fine for a small list, but as the list
approached >500 individuals, I started receiving out of memory errors from
the Jav
