> We are in the process of integrating GenePattern
> (http://www.broad.mit.edu/cancer/software/genepattern/) with BASE
> 2, and
> once we have a solution working we'll be happy to place it in the
> public
> domain.
>
> GenePattern supports all the things you are asking for below, and we
> like
: BASE ML
> Subject: Re: [base] Questions on Reporter IDs
>
> > I have a few follow up questions and comments about plugins...I am
> > trying to get MGH plugins from BASE2 working. Unfortunately I am
> > not having much luck (see ticket http://base.thep.lu.se/ticket/511).
>
> I have a few follow up questions and comments about plugins...I am
> trying to get MGH plugins from BASE2 working. Unfortunately I am
> not having much luck (see ticket http://base.thep.lu.se/ticket/511).
> So my questions are:
>
> 1) Which plugins have been successfully tested in
> Base1Pl
>
> > > One more question is whether there is a way to store in BASE
> processed > > data, i.e., data that has been processed (eg.
> normalized and > > differential expression computed) outside BASE.
> > > In a sense all data is analysed outside BASE since plugins are
> not > really
>
> > > One more question is whether there is a way to store in BASE
> processed > > data, i.e., data that has been processed (eg.
> normalized and > > differential expression computed) outside BASE.
> > > In a sense all data is analysed outside BASE since plugins are
> not > really
Hi,
>
>>Thanks I found the link and now I can remove reporters. My problem now
>>is that I have 3 reproters to delete and the system allows me to
>>delete a max of 99 each time, the max number reporters displayed per
>>page, but my selection is higher. Is there a way to delete all my
>>se
Nicklas Nordborg writes:
> Ana Conesa wrote:
>
> > Thanks I found the link and now I can remove reporters. My problem now
> > is that I have 3 reproters to delete and the system allows me to
> > delete a max of 99 each time, the max number reporters displayed per
> > page, but my se
Ana Conesa wrote:
> Thanks I found the link and now I can remove reporters. My problem now
> is that I have 3 reproters to delete and the system allows me to
> delete a max of 99 each time, the max number reporters displayed per
> page, but my selection is higher. Is there a way to delete a
At 09:59 12/03/2007, you wrote:
Ana Conesa wrote:
> Hi all,
>
> Maybe I should know this, but I am a bit puzzled about which is the
true
> Unique reporter ID in BASE2. When you import reporters in
BASE2 you
> have 2 columns for identification: Name (which becomes hyper linked)
and
> External
Ana Conesa wrote:
> Hi all,
>
> Maybe I should know this, but I am a bit puzzled about which is the true
> Unique reporter ID in BASE2. When you import reporters in BASE2 you
> have 2 columns for identification: Name (which becomes hyper linked) and
> External ID. Should both fields be unique
Hi all,
Maybe I should know this, but I am a bit puzzled about which is the true
Unique reporter ID in BASE2. When you import reporters in BASE2 you
have 2 columns for identification: Name (which becomes hyper linked) and
External ID. Should both fields be unique? which is the difference?
which
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