Re: [base] reporters on MergeBioAssay plug-in

2011-05-21 Thread Irina 264
Thanks, I look forwatd to this. irina > Date: Fri, 20 May 2011 11:01:39 +0200 > From: nick...@thep.lu.se > To: basedb-users@lists.sourceforge.net > Subject: Re: [base] reporters on MergeBioAssay plug-in > > Thanks for the stacktrace. It seems to be a bug in the > Base1P

Re: [base] reporters on MergeBioAssay plug-in

2011-05-20 Thread Nicklas Nordborg
utionRequest.java:116) > at > net.sf.basedb.core.InternalJobQueue$JobRunner.run(InternalJobQueue.java:510) > at java.lang.Thread.run(Thread.java:636) > > > > > > > Date: Fri, 20 May 2011 09:21:12 +0200 > > From: nick...@thep.lu.se > > To: basedb-users@lists.sourceforge.ne

Re: [base] reporters on MergeBioAssay plug-in

2011-05-20 Thread Irina 264
Version 2.1 > Date: Fri, 20 May 2011 09:21:12 +0200 > From: nick...@thep.lu.se > To: basedb-users@lists.sourceforge.net > Subject: Re: [base] reporters on MergeBioAssay plug-in > > On 2

Re: [base] reporters on MergeBioAssay plug-in

2011-05-20 Thread Irina 264
t.java:116) at net.sf.basedb.core.InternalJobQueue$JobRunner.run(InternalJobQueue.java:510) at java.lang.Thread.run(Thread.java:636) > Date: Fri, 20 May 2011 09:21:12 +0200 > From: nick...@thep.lu.se > To: basedb-users@lists.sourceforge.net > Subject: Re: [base] repo

Re: [base] reporters on MergeBioAssay plug-in

2011-05-20 Thread Nicklas Nordborg
On 2011-05-20 09:04, Irina 264 wrote: > Hi Nicklas, > > Thanks for the quick reply. > > I run RMAExpress with Affy data, then I done filtering with equal size > of arrays afterwards. > > Then I run MergeBioAssay (with Base1pluginExecuter) to find average > between replicates (grouping assays by con

Re: [base] reporters on MergeBioAssay plug-in

2011-05-20 Thread Irina 264
edb-users@lists.sourceforge.net > Subject: Re: [base] reporters on MergeBioAssay plug-in > > On 2011-05-20 03:46, Irina 264 wrote: > > Dear team, > > > > I am working with MergeBioAssay plug-in. I created a formula for > > reporterID using rep(‘id’) as expression, beca

Re: [base] reporters on MergeBioAssay plug-in

2011-05-19 Thread Nicklas Nordborg
On 2011-05-20 03:46, Irina 264 wrote: > Dear team, > > I am working with MergeBioAssay plug-in. I created a formula for > reporterID using rep(‘id’) as expression, because other reporter > parameters (Name or ExternalID) don’t work. However, when I run > MergeBioAssay with Affy dataset I have an er

[base] reporters on MergeBioAssay plug-in

2011-05-19 Thread Irina 264
Dear team, I am working with MergeBioAssay plug-in. I created a formula for reporterID using rep(‘id’) as expression, because other reporter parameters (Name or ExternalID) don’t work. However, when I run MergeBioAssay with Affy dataset I have an error message: “Error: Raw data for raw dat