perl code for geometric hashing

2013-11-11 Thread Gurunath Katagi
Dear all, I want to write a program for geometric hashing in perl. Does anyone know, if this is a part of any perl module or someone has written the code sometime... The algorithm for the geometric hashing is provided in this paper : http://graphics.stanford.edu/courses/cs468-01-winter/papers/wr-g

Re: Reading a sequence data from a file

2013-11-11 Thread Michael Brader
Nathan has found your problem, but see below for more suggestions on your code: On 11/12/2013 02:15 AM, Alaba, Oluwafemi (IITA) wrote: *Dear ALL,* I created a file named NM021964fragment.pep (using text editor) but I could not read that particular file. *Here is the script I used:* #!/usr/b

Re: Reading a sequence data from a file

2013-11-11 Thread Nathan Hilterbrand
It looks to me like the line: The filename of the file containing the protein sequence data should instead be # The filename of the file containing the protein sequence data Nathan On Mon, 2013-11-11 at 15:45 +, Alaba, Oluwafemi (IITA) wrote: > Dear ALL, > > > I created a file named NM0

Reading a sequence data from a file

2013-11-11 Thread Alaba, Oluwafemi (IITA)
Dear ALL, I created a file named NM021964fragment.pep (using text editor) but I could not read that particular file. Here is the script I used: #!/usr/bin/perl -w #Reading protein sequence from a file The filename of the file containing the protein sequence data $proteinfilename = "NM021964fra