Hi
Have you looked at Bioperl (www.bioperl.org)?
It is goldmine of tools for bioinformatics tasks.
Correct me if I'm wrong but do not the Swiss-Prot and UniProt have the
same dataformat? You should therefore be able to use something like:
$stream = Bio::SeqIO->new(-file => $filename, -format =>
Hi,
I am writing a perl program that will extract data from a UniProt (this is a
protein database!) flatfile so that I can automatically put data into my
PostgreSQL database. I am taking out name, protein ID number, references etc
from the file.
Does anyone know if there is a script available