Package developers --
Each Bioconductor release is accompanied by release notes that mention
new packages and other significant project developments. For the
forthcoming release we would also like to include release notes for
individual packages, so that users have an easy way to survey changes
in
Hi,
Attached is the input file that I used to run EdgeR for my data set.
Ideally the input file should be able to run through the following R-script:
*library(cluster)*
*library(gplots)*
*library(Biobase)*
*library(ctc)*
*library(ape)*
*data = read.table("diffExpr.P0.0011_C1.matrix", header=T, co
hi Gustavo,
just in case it helps, here is a one-minute crash course on valgrind. a
way that helped me in the past to learn interpreting valgrind output was
to make a toy example with memory leaks and then see how valgrind was
detecting them. code the following C program under the name memleak
Hi everybody.
I am experiencing problems with rGADEM. Say I have the following script,
which I have written trying to replicate the error:
library(FDb.InfiniumMethylation.hg19)
library(BSgenome.Hsapiens.UCSC.hg19)
library(rGADEM)
annot <- get450k()
rois <- keepSeqlevels(annot[1:10], paste0('ch
On Tue, Mar 26, 2013 at 7:27 AM, Ulrich Bodenhofer wrote:
> On 03/26/2013 12:18 PM, Laurent Gatto wrote:
>
>> On 26 March 2013 09:26, Ulrich Bodenhofer
>> wrote:
>>
>>> Dear colleagues,
>>>
>>> One of my students is currently working on a package that we plan to
>>> submit
>>> to Bioconductor. I
On 03/26/2013 12:18 PM, Laurent Gatto wrote:
On 26 March 2013 09:26, Ulrich Bodenhofer wrote:
Dear colleagues,
One of my students is currently working on a package that we plan to submit
to Bioconductor. I want him to adhere to the Bioconductor coding standards
which I thought were available a
On 26 March 2013 09:26, Ulrich Bodenhofer wrote:
> Dear colleagues,
>
> One of my students is currently working on a package that we plan to submit
> to Bioconductor. I want him to adhere to the Bioconductor coding standards
> which I thought were available at
> http://wiki.fhcrc.org/bioc/Coding_S
Dear colleagues,
One of my students is currently working on a package that we plan to
submit to Bioconductor. I want him to adhere to the Bioconductor coding
standards which I thought were available at
http://wiki.fhcrc.org/bioc/Coding_Standards. However, it turned out that
the site is down o
