[Bioc-devel] Biostrings: List with DNAString does not unlist

2013-04-04 Thread Julian Gehring
Hi, Unlisting does not work on a list with a 'DNAString' as a element, the resulting object is still a list. Is this behavior intentional? Here an example that reproduces the issue in both the latest R-devel/bioc-devel and R-2.15.3/bioc-stable. library(Biostrings) d = DNAString("TTGAA

Re: [Bioc-devel] GLX extension missing on petty

2013-04-04 Thread Dan Tenenbaum
On Wed, Apr 3, 2013 at 9:45 AM, Dan Tenenbaum wrote: > Hi Jirka, > > > On Wed, Apr 3, 2013 at 9:06 AM, Jiří Hon wrote: >> Hi, >> the latest bioc build of my new package 'triplex' on petty ended with this >> error message: >> >> Warning in rgl.init(initValue) : RGL: GLX extension missing on server

Re: [Bioc-devel] Biostrings: List with DNAString does not unlist

2013-04-04 Thread Hervé Pagès
Hi Julian, On 04/04/2013 03:50 AM, Julian Gehring wrote: Hi, Unlisting does not work on a list with a 'DNAString' as a element, the resulting object is still a list. Is this behavior intentional? Here an example that reproduces the issue in both the latest R-devel/bioc-devel and R-2.15.3/bio

Re: [Bioc-devel] GLX extension missing on petty

2013-04-04 Thread Dan Tenenbaum
On Thu, Apr 4, 2013 at 4:22 PM, Dan Tenenbaum wrote: > On Wed, Apr 3, 2013 at 9:45 AM, Dan Tenenbaum wrote: >> Hi Jirka, >> >> >> On Wed, Apr 3, 2013 at 9:06 AM, Jiří Hon wrote: >>> Hi, >>> the latest bioc build of my new package 'triplex' on petty ended with this >>> error message: >>> >>> Warn