Hi all,
I have submitted a new package, it has already been build on all platforms.
I made changes to my repository and I want to start a new build. I have
incremented the version twice and received a comment "Received a valid
push; starting a build." but 12 hours later I still haven't got a comme
Hi,
I was wondering if the documentation about Git Mirrors [1] is up to date,
and in particular, what is described as scenario 2, as I noticed that the
gitsvn [2] site is down.
Is still required to disable the Git-Svn bridge or given that it has been
deprecated [3], disabling it is no longer need
On 09/29/2016 05:27 AM, Alejandra Gonzalez-Beltran wrote:
Hi,
I was wondering if the documentation about Git Mirrors [1] is up to date,
and in particular, what is described as scenario 2, as I noticed that the
gitsvn [2] site is down.
Is still required to disable the Git-Svn bridge or given tha
Hi all,
I have pushed a newer version of BridgeDbR to the repository, which
includes tests with 'testthat', but when looking at the package homepage
[0], it does not seem the test results are being picked up... I looked at
the documentation, and did not find anything that could explain it (e.g.
co
I will look into this and if need be start a new build for you.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Bioc-devel on behalf of Lidia
Looks like you forgot to bump the version.
These are the last commits:
r121440 | e.willighagen | 2016-09-27 04:58:02 -0700 (Tue, 27 Sep 2016) |
1 line
Changed paths:
M /trunk/madman/Rpacks/BridgeDbR/DESCRIPTION
I've take
Oh, duh!
OK, thanks!
Egon
On Thu, Sep 29, 2016 at 2:44 PM, Obenchain, Valerie <
valerie.obench...@roswellpark.org> wrote:
> Looks like you forgot to bump the version.
>
> These are the last commits:
>
>
> r121440 | e.willi
We have the same issue: got a "starting to build message" yesterday night
but never got a result. It worked yesterday, so I am guessing something is
up with the single package builder.
Best,
Kasper
On Thu, Sep 29, 2016 at 4:00 AM, Lidia Chrabąszcz <
chrabaszcz.li...@gmail.com> wrote:
> Hi all,
It was a problem with the single package builder. We are making the necessary
adjustments and rerunning any packages that did not receive build reports; You
should receive results later this morning.
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatist
Hi,
I've just noticed that the function getHPa package has recently changed in the
devel branch of the package, as follows:
# Old function (in the current release branch)
getHpa(id, hpadata = "NormalTissue")
#New function (in the current devel branch)
getHpa(id, hpadata = "hpaNormalTissue"
Hi,
Please do not write your own function. We encourage utilizing existing
functionality.
As long as you are using the development version of hpar, that will be the
version that is used in the upcoming release. Over the next few weeks I would
recommend checking that you are using/testing wi
Ok! Thanks very much!
Andrea
From: Shepherd, Lori
Sent: 29 September 2016 15:53:15
To: Rodriguez Martinez, Andrea; bioc-devel@r-project.org
Subject: Re: Change in the function getHPa( ) of the hpar package
Hi,
Please do not write your own function. We encour
Dear Andrea,
There won't be any additional changes to the hpar package before the
upcoming release. A new version of the HPA data is expected by the end
of the year, but that should not lead to any changes to the interface.
Best wishes,
Laurent
On 29 September 2016 15:24, Rodriguez Martinez, A
Thanks very much! It's nice to see that you've added gene symbols to the new
hpaNormalTissue dataset.
Best wishes,
Andrea
From: Laurent Gatto
Sent: 29 September 2016 16:01:57
To: Rodriguez Martinez, Andrea
Cc: bioc-devel@r-project.org
Subject: Re: [Bioc-devel] C
The TxDbs for Bioconductor 3.4 are built and available in the devel branch.
One new package has been added (version 3.4):
TxDb.Ptroglodytes.UCSC.rheMac8.refGene
These packages are live tracks and have been updated (bumped to version
3.4):
TxDb.Celegans.UCSC.ce11.refGene
TxDb.Hsapiens.UCSC.hg38.kn
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