The BioC 3.4 branch is now ready.
Remember, you always have access to 2 versions of your package in svn:
the "release" and "devel" versions.
Right now the "release" version of your package (which is
not officially released yet but will be tomorrow if
everything goes well) is in the 3.4 branch
Hello BioC developers,
We will be creating the Bioconductor 3.4 branch today in about one hour
(around 2:30pm EST).
Please stop all commits to trunk before 2:30pm EST (18:30 UTC) and do
not resume until further notice.
We will send another email when it is OK to resume commits. The
process
Thanks Hervé!
2016-10-17 2:18 GMT-05:00 Hervé Pagès :
> Hi Shilin,
>
> I answered this on the support site:
>
> https://support.bioconductor.org/p/88232/#88347
>
> Cheers,
> H.
>
>
> On 10/16/2016 08:35 PM, zhao shilin wrote:
>
>> Dear BioC team,
>>
>> I think I found
Hi Ramon,
Yes the issue is known. The vsn maintainers have fixed the problem
yesterday in svn, right before the builds started. All the failures
due to vsn not installing on the build machines should be gone in
today's report.
Cheers,
H.
On 10/17/2016 01:34 AM, Ramon Diaz-Uriarte wrote:
Dear
Hi all,
I would like to add also metaseqR in the list of packages failing to
build in malbec1 and morelia because of vsn. What would be the most
appropriate course of action for the maintainers? Wait for vsn to be
correctly built?
Best regards,
Panagiotis
On 10/17/2016 11:34 AM, Ramon
Dear All,
Several packages (at least ADaCGH2, snapCGH, tilingArray, cellHTS2) are now
(last 24 to 48 hours?) failing to build in BioC 3.4 in Linux (malbec1) and
Mac OSX (morelia). Looking at the error reports they seem to be due to vsn
not being available. Checking the vsn report
Hi Shilin,
I answered this on the support site:
https://support.bioconductor.org/p/88232/#88347
Cheers,
H.
On 10/16/2016 08:35 PM, zhao shilin wrote:
Dear BioC team,
I think I found something incorrect in TxDb.Hsapiens.UCSC.hg38.knownGene,
and reported in