Hi Mike,
Here is a more informative error from Stangling and sourcing the
vignette on the Windows builder:
...
reading in files with read_tsv
1 Error in file(con, "r") : cannot open the connection
In addition: Warning message:
In file(con, "r") :
cannot open file
'C:/Users/vobencha/Documents/R
Hi Aaron,
I'm making a ChIP-Seq analyisis pipeline using csaw, and I'm running into
an inconsistent error/segfault. I've reduced it to a test case which you
can find here:
https://www.dropbox.com/sh/2a2vpb5ek4413fx/AAAXwCaTzsAmfyPefwAbFg8Na?dl=0
The test case consists of my R workspace saved with
On 03/21/2017 08:21 PM, Hervé Pagès wrote:
Hi Leonardo,
Thanks for hunting down and isolating that bug! I tried to simplify
your code even more and was able to get a segfault with just:
setClass("A", representation(stuff="numeric"))
x <- logical(10)
x[TRUE] <- new("A")
I get the segfault
Hi Leonardo,
Thanks for hunting down and isolating that bug! I tried to simplify
your code even more and was able to get a segfault with just:
setClass("A", representation(stuff="numeric"))
x <- logical(10)
x[TRUE] <- new("A")
I get the segfault about 50% of the time on a fresh R session
Hi Alina,
I think you need to add a file named CITATION in your package (usually
under the inst folder) and use bibentry as follows
bibentry(bibtype = "Article",
title = "Combining multiple tools outperforms individual methods
in gene set enrichment analyses",
author = c(perso
Hi bioc-devel,
This is a story about a bug that took me a long time to trace. The
behaviour was really weird, so I'm sharing the story in case this
helps others in the future. I was originally writing it to request
help, but then I was able to find the issue ^^. The story ends right
now with code
Hi,
My methods paper (doi:10.1038/nmeth.4068) associated with my package BUMHMM
was accepted before I submitted the package for revision at Bioconductor. I
would like the package page to also hold the citation to the paper. What is
the best way to add this paper citation? (I cite it in the vignett
Thank you all for the explanations, and the assurance that Windows and Mac
users should still be able to install it.
Robert
On Tue, Mar 21, 2017, 2:56 AM Hervé Pagès wrote:
> On 03/20/2017 02:31 PM, Dan Tenenbaum wrote:
> > As I recall, there were issues building RCytoscape (and packages that
>
Thanks for taking the time to reply, James.
I was confused by the fact that R 3.3.3 was released a few weeks ago and I was
thinking that was previously the R-devel… meaning the R version you’re supposed
to develop against would have just changed a few weeks ago. I re-read the
sentence “R has a
