[Bioc-devel] Error following post acceptance instructions: permission denied

Hi I have had my package accepted to the bioconductor (M3C). I then followed the instructions in the email to add a ssh key to my account, then summited this to the bioconductor. I tested the key using the github instructions and it seemed to work fine. Next I ran: git remote add upstream g...@g

Re: [Bioc-devel] Bioconductor package landing pages

Hi Nima, Please check http://bioconductor.org/checkResults/3.6/bioc-LATEST/biotmle/malbec1-buildsrc.html, it shows that the page was generated on Sunday. There is also a snapshot date when your repo was captured by the nightly build, and even the last commit. But this issue, is because your pa

[Bioc-devel] Bioconductor package landing pages

Hello All --- After the relatively recent migration from SVN to git, I've followed the various guidelines for linking the GitHub repo of my package biotmle to the Bioconductor git server, I've pushed several important updates to the Bioc master branch. My unde

[Bioc-devel] ensembl 90 gtfs and fasta twobits have been added to AnnotationHub

The ensembl 90 gtf (converted to GRanges on the fly) and fasta (twobit files) been added to AnnotationHub and are currently available in Bioc3.6 (development) > hub = AnnotationHub() snapshotDate(): 2017-08-28 > length(query(hub, c("ensembl", "gtf", "release-90"))) [1] 248 > length(query(hub, c(

[Bioc-devel] git server maintenance

git.bioconductor.org will be rebooted for routine maintenance on Tuesday, August 29 at 8am EST. This should only take a few minutes and in general should not be noticed. If you push or pull to the git server at this exact time the action may fail and you'll have to retry. I'll post back when thi

Re: [Bioc-devel] [Bioconductor/Contributions] DMCHMM (#430)

Please comment on the issue that the package is ready for another review so your reviewer knows you are finished making changes. It is also nice to include a summary of what has been changed on the github issue. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department o