Thanks Dario and Mike for looking into this.
In the mean time I added makeTxDbFromEnsembl() for creating a TxDb
object by querying directly an Ensembl MySQL server. Only lightly
tested but so far seems to faster and more reliable than
makeTxDbFromBiomart():
> library(GenomicFeatures)
>
FYI I also began a project to support an additional backend;
https://github.com/PeteHaitch/matterArray. It's incomplete and may not work
with the current version of DelayedArray (it's ~3 months old and I was
naughtily using some internal functions of DelayedArray). I hope to return
to this soon
Hi Francesco,
On 10/29/2017 10:10 AM, Francesco Napolitano wrote:
Hi all,
packages submitted to Bioconductor are required to include at least
one vignette. However, it seems that this rule does not hold for some
core packages, such as HDF5Array and DelayedArray. Is there any
special reason for
Hi all,
packages submitted to Bioconductor are required to include at least
one vignette. However, it seems that this rule does not hold for some
core packages, such as HDF5Array and DelayedArray. Is there any
special reason for this?
In particular, I'd like to read more about how to create a
