[Bioc-devel] duplicate commits for nucleoSim

2019-04-10 Thread Astrid Deschenes
Hi, ​ The nucleoSim package has duplicate commits dating from long time (older than October 2016).​ ​ I have checked the package by doing a fresh clone directly from Bioconductor and those duplicate commits seem to be present there.​ ​ Can you confirm that it is the case and if so, provide

[Bioc-devel] PoTRA building Man PDF

2019-04-10 Thread margaret linan
Hi - During the last build, the man page received some warnings, I’m not sure what I am doing wrong. The items are nestled within the argument tag and the curly braces are in place. Found the following significant warnings: Warning: /home/biocbuild/bbs-3.9-bioc/meat/PoTRA/man/potra_man.Rd:25:

Re: [Bioc-devel] Packages with broken unit tests because of sample() change in R 3.6

2019-04-10 Thread Leonardo Collado Torres
Thanks Hervé, I also found this tweet by John Muschelli useful for this situation https://twitter.com/StrictlyStat/status/1103303028751372289 where he suggests using suppressWarnings(RNGversion("3.5.0")) That's what I did for example in