Oops, I said 'vignettes' but meant the reference manual. Html vignettes (from
appropriate Rmd files) are have been available for a number of years.
Martin
On 9/25/19, 5:10 PM, "Martin Morgan" wrote:
Our recollection is that there is no 'flag' in R CMD build to create HTML
rather than PDF
On Wed, Sep 25, 2019 at 2:28 PM Stuart Lee wrote:
>
> Chiming in to say +1 to this. I also use pkgdown for the same purpose as
> Laurent. With some kind of CI service you can automate the build of the
> website after a successful R CMD CHECK. Not sure how tricky this would be to
> integrate wit
Chiming in to say +1 to this. I also use pkgdown for the same purpose as
Laurent. With some kind of CI service you can automate the build of the website
after a successful R CMD CHECK. Not sure how tricky this would be to integrate
with Bioconductor's build system.
__
Our recollection is that there is no 'flag' in R CMD build to create HTML
rather than PDF vignettes; without that it would be non-trivial to create html
output, e.g., links across pages. (I *think* the installed package html help
pages are generated on the fly...)
What is your experience with p
Often this means that there is some resource in your vignette that has not been
terminated correctly, e.g., a parallel process that has not be stopped or a
graphical device that is still open.
Martin
On 9/25/19, 4:46 AM, "Bioc-devel on behalf of Alberto Valdeolivas"
wrote:
Hello all,
I think this would be very useful. This is one of the reasons I create pkgdown
sites for my packages: manual pages, news and html vignettes are readily
available for all (including me) to browse.
Best wishes,
Laurent
From: Bioc-devel on behalf of Ludwi
Dear Bioc-Team,
I repeatedly wondered whether it would be possible to display the reference
manual
as HTML instead of PDF on a package's landing page. This is already possible
for vignettes.
HTML reference manuals have at least two advantages:
1. links to functions of other package in the man
Hello all,
I am submitting the following new package to Bioconductor:
https://github.com/Bioconductor/Contributions/issues/1263
R CMD BUILD is reporting the following ERROR when running in Windows server:
Error: processing vignette 'OmnipathR.Rnw' failed with diagnostics: Failed
to locate the '
