Could this be another instance where you need to specify mode = "wb" when
you call download.file()? I've seen many examples of Windows downloads
being corrupted because it uses mode = "w" by default.
Presumably BiocFileCache would both handle this correctly and save multiple
downloads, so it's a
Thanks this seems like a problem with large file size on Windows, probably in
Rhtslib.
It might be better practice and more reliable to use BiocFileCache for
downloads, e.g.,
url =
"ftp://ftp.plantgenie.org/Tutorials/RnaSeqTutorial/data/star/unitTest/213.1_subset_sortmerna_trimmomatic_sorted.b
I have faced the same issue as described in this post and I agree with Aaron,
that it would be nice if the doc on the website where extended to specify the
version as in "BiocManager::install(version='3.10’)"
Best,
Nico
> On 15 Nov 2019, at 00:32, Aaron Lun
> wrote:
>
> I would assume that
Hej!
The easyRNASeq package is not building on tokay1, with what seems to be a file
decompression issue?
https://master.bioconductor.org/checkResults/3.10/bioc-LATEST/easyRNASeq/tokay1-buildsrc.html
It works fine on the other OSs.
The error is triggered while downloading a small dataset durin
