Re: [Bioc-devel] Issues with images in vignette

2020-11-19 Thread Mike Smith
Thanks for the information Sudeep. I'm not sure there should be any changes in BiocStyle between 2.18.0 and 2.19.0 (other than the version number!) but there's clearly something weird going on. I'll take a look tomorrow and report back in https://github.com/Bioconductor/BiocStyle/issues/83 Cheer

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2020-11-19 Thread kqc
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Re: [Bioc-devel] Issues with images in vignette

2020-11-19 Thread Sudeep Sahadevan
Thank you... Perhaps I can add some additional info here. I was comparing the sessionInfo from my local build based on RELEASE 3_12 docker image (where the images are rendered fine) against the sessionInfo from the release vignette. This is what I found: Packages/Package versions unique to sessi

Re: [Bioc-devel] Issues with images in vignette

2020-11-19 Thread Martin Morgan
Nice images! If I narrow the browser window, the figures appear! When I 'inspect' the source, for instance for 'Figure 4: chance of cross talk' I see that the image has tag whereas figures that show up have class="widefigure". I guess smallfigure is because in the Rmd there is ```{r, fig.ca

[Bioc-devel] Issues with images in vignette

2020-11-19 Thread Sudeep Sahadevan
Dear all, We are facing some issues with the html vignette of our package DEWSeq ( https://bioconductor.org/packages/release/bioc/vignettes/DEWSeq/inst/doc/DEWSeq.html). The issue is that some of the images are rendered too small and for a couple of images, the size of the final rendered images i