[Bioc-devel] How to proper write documentation (Rd) file for setReplaceMethod

2021-04-14 Thread Jianhong Ou, Ph.D.
Hi All, I got warning message in windows building like: Rd warning: cannot open file 'D:/biocbuild/bbs-3.13-bioc/meat/trackViewer.buildbin-libdir/00LOCK-trackViewer/00new/trackViewer/help/$<-,track-method.html': Invalid argument I used RoxygenNote to create the Rd file and the note I wrote li

[Bioc-devel] R CMD CHECK time out on Windows machine

2021-04-14 Thread Murphy, Alan E
Hi all, I am submitting [EWCE](https://github.com/NathanSkene/EWCE) to bioconductor and have been working to reduce the runtime of the R CMD Check which was causing issues. I have improved the run time and locally, on my mac, it is now running in 11m 56.5s. However, I still get a timeout error

[Bioc-devel] Bioconductor Release 3.12 and Bioconductor Devel 3.13 Code Freeze Deadlines!

2021-04-14 Thread Kern, Lori
Release 3.12 Code Freeze: The release 3.12 branch will be frozen May 4th. All code changes should be committed by May 3rd. After this date there will be no updates to Bioconductor 3.12 packages in Bioconductor. Devel 3.13 Deadline: The deadline for packages to pass R CMD build/check without e