Re: [Bioc-devel] BiocParallel and Shiny

2022-07-07 Thread Martin Morgan
OK; I made BiocParallel a little easier to use (bpiterate() can now take as its first argument a vector; it does not need to have an 'iterator' function). One needs to install the 'devel' version of the package, currently BiocManager::install("Bioconductor/BiocParallel") Here's the complete

Re: [Bioc-devel] BiocParallel and Shiny

2022-07-07 Thread Giulia Pais
Hi, thanks for the reply. Yes I’ve looked at this article, it seems to me like I have to access to the “status” of a worker in order to do that, correct? I mean, is there a way through BiocParallel interface in which I can receive a notification when a worker has finished a task? It is not clear

[Bioc-devel] BiocParallel and Shiny

2022-07-07 Thread Giulia Pais
Hello, I have a question on the use of BiocParallel with Shiny: I would like to show a progress bar on the UI much like the standard progress bar that can be set in functions like bplapply() � is it possible to do it and how? I haven�t found anything on the topic in the documentation