[Bioc-devel] Openssl is not available in netConnectHttps for importing remote BigWig files

2023-02-23 Thread Leonardo Collado Torres
Hi Bioc-devel, recount had been failing in recent months at bioc-release and bioc-devel. I finally had the time to dive into it, and eventually that led to an error on rtracklayer that I reported at https://github.com/lawremi/rtracklayer/issues/83. Michael Lawrence noticed that my R session

Re: [Bioc-devel] Installation of XCMS on R

2023-02-23 Thread Vincent Carey
please pose your question with details of error messages to support.bioconductor.org no telephone contacts should be provided or used On Thu, Feb 23, 2023 at 6:04 PM insaf ben wrote: > Hello, > > I have a problem installing the xcms library on my R studio 4.2. Could you > help me do this plz ?

Re: [Bioc-devel] Issue with setting Maintainer in new package submission

2023-02-23 Thread Andrew Wight
Yup, just got the confirmation and you were bang-on Mike - thanks so much for your help! -Andrew On Thu, Feb 23, 2023 at 8:27 AM Kern, Lori wrote: > It looks like this was resolved > > http://bioconductor.org/spb_reports/flowGate_buildreport_20230223082234.html > > Lori Shepherd - Kern > >

Re: [Bioc-devel] Issue with setting Maintainer in new package submission

2023-02-23 Thread Kern, Lori
It looks like this was resolved http://bioconductor.org/spb_reports/flowGate_buildreport_20230223082234.html Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263

Re: [Bioc-devel] Installation of XCMS on R

2023-02-23 Thread Kern, Lori
These types of questions are better asked on the support site so the larger Bioconductor community can help. https://support.bioconductor.org/ Please remember to include the code you are trying to run and full output and sessionInfo so we can better assist you. Cheers Lori Shepherd - Kern

[Bioc-devel] Installation of XCMS on R

2023-02-23 Thread insaf ben
Hello, I have a problem installing the xcms library on my R studio 4.2. Could you help me do this plz ? my phone number is +33(0)769345085 [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list

[Bioc-devel] Trouble modifying read-only ChipDb SQLite database

2023-02-23 Thread Amanda Hiser via Bioc-devel
Hello all, I�m creating a ChipDb package for a protein-based assay. To generate a template package structure and the SQLite database file, I used `AnnotationForge::makeDBPackage()` with a "HUMANCHIP_DB" schema. I�m now trying to add new tables to the database by modifying the `zzz.R` file,