Re: [Bioc-devel] Can't reproduce a latex error

2023-04-20 Thread Mike Smith
Hi Mark, I don't know how to identify the Latex used on the build system, but I see the same problem with GRridge on my system that uses Latex installed via the tinytex package. I think the issue is the use of \describe{} in https://code.bioconductor.org/browse/GRridge/blob/master/man/GRridge-pac

Re: [Bioc-devel] Windows build error

2023-04-20 Thread RAN HU
Dear BioC team, I wonder if this error is caused by your Windows environment. Or is there anything I can do to fix it? If this Windows build error is not solved, will cfTools still be included in the 3.17 release version? Thanks in advance! Best, Ran On Tue, Apr 18, 2023 at 4:46 PM RAN HU wro

[Bioc-devel] Package passing on linux machine, Vignette can't find functions on Windows.

2023-04-20 Thread jermiah joseph
Hi all, one of my packages is passing successfully all install, build, & check on the Ubuntu host, but the vignette building on the Windows server cant find the functions within the package. http://bioconductor.org/checkResults/devel/bioc-LATEST/PharmacoGx/palomino3-buildsrc.html http://bioconduc

[Bioc-devel] Can't reproduce a latex error

2023-04-20 Thread Wiel, M.A. van de (Mark)
My package renders a latex error when compiled by the BioC compilers. I can�t, however, reproduce that error when checking locally in Rstudio. How can I make sure the same latex settings are used as the BioC compilers do? -Mark van de Wiel __ A