Re: [Bioc-devel] about deprecate package DNABarcode

2024-03-12 Thread Kern, Lori via Bioc-devel
The package is deprecated in devel. It will remain listed in the next Bioc 3.19 release, but deprecated, and removed from anticipated 3.20. The package will have up until the fall release (generally late Oct / early Nov) to reinstate before it will be removed. Cheers, Lori Shepherd - Kern

Re: [Bioc-devel] Unable to install "spoon" package due to R version 4.4 dependence

2024-03-12 Thread Kern, Lori via Bioc-devel
mac can get R-devel at this location https://mac.r-project.org/ Cheers Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bio

Re: [Bioc-devel] Deprecate pwOmics package

2024-03-12 Thread Kern, Lori via Bioc-devel
Thank you . We will begin the deprecation process. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of

[Bioc-devel] Deprecate pwOmics package

2024-03-12 Thread Torsten Schoeps
Hello, I would like to deprecate the pwOmics-Package from Bioconductor. The package wasn't written/developed by me and the original author left our department long time ago. Now building  the package for BioC 3.19 recently failed and I have neither time nor knowledge to fix the package. Regard

Re: [Bioc-devel] un-deprecation gscreend

2024-03-12 Thread Katharina Imkeller
Thank you Lori! I also pushed the changes to RELEASE_3_18 branch now. Best, Katharina On 11.03.24 16:47, Kern, Lori wrote: > Yes we will un-deprecate the package.  If possible it would be great > to also push the changes to RELEASE_3_18 branch as well if you have > not done so already > https://