[Bioc-devel] muleaData problems reported in the Build/check report for BioC 3.19 experimental data

2024-03-20 Thread Eszter Ari
Hi, I have a question a problem reported in the Build/check report for BioC 3.19 experimental data: I have created an experimental data package: https://github.com/ELTEbioinformatics/muleaData I have got this message from bbs-nore...@bioconductor.org: According to the Build/check report for BioC 3

Re: [Bioc-devel] muleaData problems reported in the Build/check report for BioC 3.19 experimental data

2024-03-20 Thread Mike Smith
Hi Eszter, If you're using ExperimentHub in your vignette then you need to add that to the Suggests field in your DESCRIPTION file. The R CMD check output you linked to mentions a similar issue for the code in your examples: * checking for unstated dependencies in examples ... WARNING '::' or ':

Re: [Bioc-devel] muleaData problems reported in the Build/check report for BioC 3.19 experimental data

2024-03-20 Thread Eszter Ari
Hi Mike, Many thanks! Does this: "Please take the time to address this by committing and pushing changes to your package at git.bioconductor.org" mean that I have to push it to the devel branch like this? Is this mean that I have to push the changes to the devel branch of the # to connect with t

Re: [Bioc-devel] Unable to update Bioconductor Git Credentials

2024-03-20 Thread Kern, Lori via Bioc-devel
I'm very sorry I did not see the email on March 13 regarding the BiocCredentials app. I will send you an email off list to work out the details. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton St

Re: [Bioc-devel] about deprecate package DNABarcode

2024-03-20 Thread Pedro Sánchez Sánchez
Hi all, I also tried to contact the author on the available email contacts (waiting for response from tilo.buschmann...@gmail.com; depreciated email tilo.buschm...@izi.fraunhofer.de) I found on the internet. If I get a response, I'll let you know. It will be a pity if DNABarcodes is depreciated f