Hi All,
We're pleased to announce that our package 'rCGH' is now available on
Bioconductor (devel).
This package provides functions for analyzing and interactively visualizing
array-based genomic profiles. As inputs, rCGH supports Agilent dual-color
Feature Extraction files (.txt), from 44 to
, such as
'SNPlocs.Hsapiens.dbSNP142.GRCh37', into an 'XtraSNPlocs'?
Ne remets jamais à demain... :p
Cheers,
Fred
Frederic Commo
Bioinformatics, U981
Gustave Roussy
De : Hervé Pagès [hpa...@fredhutch.org]
Date d'envoi : mercredi 1 juillet 2015 20:25
À : COMMO Frederic
Hi,
I'm trying to map rsi Ids provided in the Affymetrix cytoScanHD arrays, using
the 'SNPlocs.Hsapiens.dbSNP142.GRCh37' package, and rsid2loc().
It turns out that some of these rsi ids are unknown, e.g. rsi7553394, and
rsi2loc() fails on the entire search.
It would be nice if rsi2loc() would
Erratum: the rsiIds come from Affymetrix-SNP6.0, not cytoScanHD.
Frederic Commo
Bioinformatics, U981
Gustave Roussy
De : Bioc-devel [bioc-devel-boun...@r-project.org] de la part de COMMO Frederic
[frederic.co...@gustaveroussy.fr]
Date d'envoi : lundi 29
Dear Martin,
All of these suggestions sound good.
Wolfgang's suggestion regarding possible associated papers might be also great.
Another useful information would be to point to other publications where a
given package was used, and cited.
I don't know if it's technically possible, but it
