I apologize if this is the incorrect place to post this but I need some
assistance with the following build report. I submitted my fix for this
problem two days ago to my git repo which has the corresponding svn
bridge. Everything builds correctly on my system and Travis CI but doesn't
appear to
I can get in with 'readonly' but not my user account. Is there any way for
me to reset it?
Charles
On Tue, Jul 21, 2015 at 1:44 PM, Dan Tenenbaum
wrote:
>
>
> - Original Message -
> > From: "Charles Determan"
> > To: bioc-devel@r-project.org
Okay, I made it in and committed the bug fix (svn commit). The package
should build properly now. Thank you for your help.
Charles
On Tue, Jul 21, 2015 at 1:58 PM, Dan Tenenbaum
wrote:
>
>
> - Original Message -
> > From: "Charles Determan"
> > To
This may be more appropriate to ask the covr package maintainer on his
github page (https://github.com/jimhester/covr/issues).
Charles
On Mon, Aug 17, 2015 at 1:13 PM, Leonard Goldstein <
goldstein.leon...@gene.com> wrote:
> Hi Jim,
>
> I noticed that when covr calculates test coverage, function
This initially came to my attention with this question on StackOverflow (
http://stackoverflow.com/questions/32139378/travis-ci-failing-to-install-bioconductor?noredirect=1#comment52184421_32139378).
I have noticed that my own bioconductor package has continued to fail over
the past several days wh
I am trying to run the basic install with biocLite. I am running R 3.2.2
on Ubuntu 14.04.
I install the BiocInstaller package with
source("http://bioconductor.org/biocLite.R";)
I then try again to just install S4Vectors but it errors out on the
src_utils file with the following error:
str_util
biocLite("S4Vectors") plus your sessionInfo(). Thanks!
>
> H.
>
>
> On 08/27/2015 06:19 AM, Charles Determan wrote:
>
>> I am trying to run the basic install with biocLite. I am running R 3.2.2
>> on Ubuntu 14.04.
>>
>> I install the BiocInstaller pac
Thanks Herve, that solved the problem. It installed correctly now.
Regards,
Charles
On Thu, Aug 27, 2015 at 4:14 PM, Hervé Pagès wrote:
> On 08/27/2015 10:21 AM, Charles Determan wrote:
>
>> I am simply using gcc-4.8
>>
>> Here is the full output:
>>
>>
Hi Jiri,
I believe you can use the BH package. It contains most of the Boost headers.
Regards,
Charles
On Saturday, January 23, 2016, Jiří Hon wrote:
> Dear package developers,
>
> I would like to ask you for advice. Please, what is the most seamless
> way to use regular expressions in C/C++ c
Hi,
I received a notification that my package was failing some tests. I have
since made the necessary fixes and pushed my changes to the github repo.
Previously this would result in http://gitsvn.bioconductor.org/git-push-hook
updating the package for bioconductor. I noticed however that this
de
Not to be pushy but did anyone have any insights with this? I would hate
to have my package still sitting with the bug fix it requires.
Thanks,
Charles
On Wed, Jan 4, 2017 at 11:15 AM, Charles Determan
wrote:
> Hi,
>
> I received a notification that my package was failing some tests
anges should be with
bioconductor to apply accordingly.
Regards,
Charles
On Thu, Jan 5, 2017 at 9:22 AM, Martin Morgan wrote:
> On 01/05/2017 10:18 AM, Charles Determan wrote:
>
>> Not to be pushy but did anyone have any insights with this? I would hate
>> to have my package stil
ter.bioconductor.org/checkResults/3.5/bioc-LATEST/). Did I miss
another step or is the build process reporting slow or perhaps I am looking
in the wrong place still?
Regards,
Charles
On Thu, Jan 5, 2017 at 9:47 AM, Charles Determan
wrote:
> That seems to have been the issue. It had been some t
this error means I would sincerely
appreciate it.
Regards,
--
Dr. Charles Determan, PhD
Integrated Biosciences
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actually submit the package for review?
Regards,
--
Dr. Charles Determan, PhD
Integrated Biosciences
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Thanks Dan, could you confirm that the email statement (packages NEAR
bioconductor POINT org) means packa...@bioconductor.org ? I don't
recognize the NEAR notation.
Charles
On Fri, Mar 13, 2015 at 1:59 PM, Dan Tenenbaum
wrote:
>
>
> - Original Message -----
> > From:
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