Hi Yu,
It looks like you’re using R Markdown v2 instead of R Markdown v1 so you will
have to change your vignette engine.
Your vignette likely contains %\VignetteEngine{knitr::knitr}
You will need to change this to %\VignetteEngine{knitr::rmarkdown}
And you will need to add both knitr and rmarkdo
Hello,
I recently updated my bioconductor package via svn. The package was built
successfully on my computer via R CMD build scde and passed R CMD check scde
and R CMD BiocCheck scde. But the build report on Bioconductor ran into the
following errors when building the vignettes:
* checking for
n the full richness of
> your software, but easily computed within the available time.
>
> Martin
>
> ________
> From: Bioc-devel on behalf of Fan, Jean
>
> Sent: Thursday, January 28, 2016 8:37 AM
> To: bioc-devel@r-project.org
> Sub
Hi Kieran,
It looks like your Travis build is failing because of your vignettes:
Error: processing vignette 'contiBAIT.Rnw' failed with diagnostics:
6542 chunk 13 (label = orderAllLinkageGroupsExampleb)
6543Error in if (spearmanCor < 0) { : missing value where TRUE/FALSE needed
6544
6545
The
