Re: [Bioc-devel] rGADEM crash

2013-03-27 Thread Gustavo Fernández Bayón
contain the lines below that potentially produce memory leaks and 'memoryleaks.txt' would contain the output from valgrind. and finally try to match at least the error messages you saw on the toy examples to what valgrind is saying about your package on memoryleaks.txt good luck!!

[Bioc-devel] rGADEM crash

2013-03-26 Thread Gustavo Fernández Bayón
Hi everybody. I am experiencing problems with rGADEM. Say I have the following script, which I have written trying to replicate the error: library(FDb.InfiniumMethylation.hg19) library(BSgenome.Hsapiens.UCSC.hg19) library(rGADEM) annot <- get450k() rois <- keepSeqlevels(annot[1:10], paste0('ch