support site,
> https://support.bioconductor.org.
>
> Jim
>
>
>
> On Fri, May 27, 2016 at 11:05 AM, Jesper Gådin <jesper.ga...@gmail.com>
> wrote:
>
>> Hello everyone,
>>
>> I find inconsistent results from applyPileups and pileLettersAt. I hav
Hello everyone,
I find inconsistent results from applyPileups and pileLettersAt. I have a
placed a full example on github, so you can try the code with data that
will reproduce what I am suspecting is a "bug".
#Repo with reproducible example
https://github.com/pappewaio/ExampleData
#Here a
tinue/--skip increases. Last time it lead to me missing correctly
> editing one of the files which broke my package in svn.
>
> Diego
>
> On Fri, Sep 18, 2015 at 5:13 PM, Jesper Gådin <jesper.ga...@gmail.com>
> wrote:
> > Hi Diego,
> >
> > I had the sam
) by putting dimensions on a list. That
way, generic code can at least assume consistent dimensionality, even if
the values are complex. I don't really have any use cases though; just
seems possibly beneficial in the abstract.
On Wed, Apr 1, 2015 at 1:19 AM, Jesper Gådin jesper.ga...@gmail.com
wrote
Hi!
The SummarizedExperiment class is an extremely powerful container for
biological data(thank you!), and all my thinking nowadays is just circling
around how to stuff it as effectively as possible.
Have been using 3 dimension for a long time, which has been very
successful. Now I also have a
Hi all,
Tried to R CMD build and check the AllelicImbalance package, but got a
strange NOTE during R CMD check (see below). Have checked previous versions
of AllelicImbalance to try to find when the NOTE/Error got introduced, but
the R CMD check on the old build files gives the same response. And
.
Michael
On Mon, Feb 17, 2014 at 1:10 AM, Jesper Gådin jesper.ga...@gmail.comwrote:
Hi,
Have come across a cigar-vector that is problematic to process.
#load package
library(GenomicAlignments)
#load data (see attached file)
load(2014-02-17-cigarExample.rdata)
#run function
Hi,
Have come across a cigar-vector that is problematic to process.
#load package
library(GenomicAlignments)
#load data (see attached file)
load(2014-02-17-cigarExample.rdata)
#run function cigarToRleList
cigarRle - cigarToRleList(cigarExample)
Error in .Call2(Rle_constructor, values,
, Dec 28, 2012 at 8:31 PM, Dan Tenenbaum dtene...@fhcrc.org wrote:
On Fri, Dec 28, 2012 at 11:01 AM, Jesper Gådin jesper.ga...@gmail.com
wrote:
After some fighting I have now the bleeding edge of R and the
bioconductor
packages, and my own package was installed without any errors. Perfect
