[Bioc-devel] Deprecation of dualKS and Slinky packages

2021-10-04 Thread Kort, Eric
Colleagues, As I am now focused entirely on clinical and administrative duties at my institution, I would like to deprecate the following packages: dualKS slinky Please advise on next steps. Thank you! -Eric [[alternative HTML version deleted]] _

[Bioc-devel] Bioconductor build system using old commit

2021-09-17 Thread Kort, Eric
Good day. I have made updates to my package, slinky. I pushed my changes both to my github rep, and the Bioconductor git repository. My remotes are set up as follows: > git remote -v origin https://github.com/vanandelinstitute/slinky (fetch) origin https://github.com/vanandelinstitute/sl

[Bioc-devel] push upstream master denied

2018-09-21 Thread Kort, Eric
I am attempting my first push of updates to my recently accepted package, slinky, which is in the development branch of BioConductor. When I try to push to the remote I get: FATAL: W any packages/slinky e.kort DENIED by fallthru (or you mis-spelled the reponame) fatal: Could not read from remote

Re: [Bioc-devel] reopen issue (submission) on github

2018-05-17 Thread Kort, Eric
: Shepherd, Lori [mailto:lori.sheph...@roswellpark.org] Sent: Thursday, May 17, 2018 9:56 AM To: Kort, Eric ; bioc-devel@r-project.org Subject: Re: [Bioc-devel] reopen issue (submission) on github We will reopen the issue for you. Please make sure the webhook is still initialized to trigger

[Bioc-devel] reopen issue (submission) on github

2018-05-17 Thread Kort, Eric
Good morning. I recently submitted a package via the Contributions repository (issue #660). Due to the "two weeks notice" policy, my submission/issue was closed whilst I was working on responding to reviewer suggestions. I have since made changes to the package in response to reviewer comment