[Bioc-devel] git push access to MsCoreUtils repository

2020-06-24 Thread Sebastian Gibb via Bioc-devel
mis-spelled the reponame) fatal: Could not read from remote repository. Please make sure you have the correct access rights and the repository exists. Could you please add me and Johannes to this repository as well? Kind regards, Sebastian Gibb

Re: [Bioc-devel] git permission denied to synapter repository

2018-01-17 Thread Sebastian Gibb
t, just a heads up, I’m adding Sebastian to the “synapter" package. > > Best, > > Nitesh > > > On Jan 17, 2018, at 4:07 PM, Sebastian Gibb <m...@sebastiangibb.de> wrote: > > > > Dear Bioconductor admins, > > > > I am the (co-)maintainer of the s

[Bioc-devel] git permission denied to synapter repository

2018-01-17 Thread Sebastian Gibb
Dear Bioconductor admins, I am the (co-)maintainer of the synapter package. I tried to push some changes the first time after the conversion to git and got the following error: ``` > git push upstream master FATAL: W any packages/synapter s.gibb DENIED by fallthru (or you mis-spelled the

Re: [Bioc-devel] EXTERNAL: Re: Git permission denied (publickey)

2017-10-10 Thread Sebastian Gibb
On 2017-10-10 22:48:43, martin.mor...@roswellpark.org wrote: > On 10/10/2017 04:43 PM, Sebastian Gibb wrote: > > Dear Biocondcutor admins, > > > > I am the maintainer of the cleaver package (and a co-maintainer of MSnbase, > > Pbase, synapter). As many other user me

Re: [Bioc-devel] names, mcols and metadata are not changed in [- operator of class Vector

2014-05-07 Thread Sebastian Gibb
expect this to destroy the names or metadata cols that are on 'x'. Hope that makes sense, Cheers, H. On 05/07/2014 11:59 AM, Sebastian Gibb wrote: Dear all, today I observed an unexpected behaviour (at least for me) using the [- operator on classes that inherited Vector. I want

Re: [Bioc-devel] Gviz AnnotationTrack fails when [-operator is defined

2014-05-05 Thread Sebastian Gibb
function) Kind regards, Sebastian On 2014-05-05 16:17:41, florian.ha...@novartis.com wrote: Something seems to be messing up the methods table when you define the ³[³ method from the global environment. Any advice from the name space gurus on the list? Florian On 04/05/14 13:48, Sebastian

[Bioc-devel] Gviz AnnotationTrack fails when [-operator is defined

2014-05-04 Thread Sebastian Gibb
Dear Florian, dear all, I want to use Gviz::AnnotationTrack to visualize my own class. This class overloads the [ operator. It seems that just the definition of my own [ results in a method dispatching error: Error in callNextMethod(x, i) : bad object found as method (class “function”) After

[Bioc-devel] BiocStyle and knitr: option clash for package color

2013-07-22 Thread Sebastian Gibb
Dear BiocStyle-Maintainer, I try to use BiocStyle (0.0.13) in a knitr vignette. It seems both knitr and BiocStyle include the color package with different options (knitr: without any option; BiocStyle with usenames,dvipsnames). That's why R CMD build fails: ... * installing the package to