Hi All
The check of my package is failing locally due to the error in
"csaw::scaledAverage" function. Untill version 3.9, I used to pass a
DGElist object to this function call as follows:
/dat.y <- csaw::asDGEList(data, assay = assay.data)//# create DGElist
from SE object
//dat.y <- edgeR::est
ion is the "Single
> Package Builder" (SPB) and is not the same as the main builder used
> for the daily builds (BBS). It would help if you could provide the link
> to the build report where you see the error or at least the name of
> your package.
>
> On 05/30/2018 07:30 AM, V
through a third package, it needs to be fixed (perhaps it has
> been but did not propagate, see the build reports for packages in the
> devel branch http://bioconductor.org/checkResults/ , and look for the
> stoplight at the right).
>
> Martin
>
> On 05/30/2018 09:56 AM
[[j]]) : namespace 'IRanges' 2.15.13 is already loaded, but == 2.14.10
is required
How do I refresh the cache?
--
Best Wishes
Vivek
----
*Vivek Bhardwaj*
PhD Candidate | International Max Planck Research School
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51, Freiburg
ndows therefore I have to use the older one there
for testing.
Thanks for the comment on biocparallel. I would try this.
Best,
Vivek
On 03/29/2018 03:23 PM, Martin Morgan wrote:
> Hi Vivek...
>
> On 03/29/2018 08:39 AM, Vivek Bhardwaj wrote:
>> Dear All
>>
>>
iocparallel.
Best Wishes
Vivek
----
*Vivek Bhardwaj*
PhD Candidate | International Max Planck Research School
Max Planck Institute of Immunobiology and Epigenetics
Stübeweg 51, Freiburg
E-mail: bhard...@ie-freiburg.mpg.de
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