Hej Bioc!
I've got the following error and can't really track its origin.
Cheers,
Nico
> aln2 <- readAligned(getwd(),pattern="subset.bam$",type="BAM")
Error: Input/Output
'readAligned' failed to parse files
dirPath: '/Users/delhomme/Documents/Git/RnaSeqTutorial'
pattern: 'subset.bam$'
I think we'd need to see your files in order to try to reproduce this.
Dan
- Original Message -
> From: "Nicolas Delhomme"
> To: "bioC-devel"
> Sent: Friday, March 27, 2015 11:04:17 AM
> Subject: [Bioc-devel] "forceAndCall" is not a
enbaum wrote:
>
> I think we'd need to see your files in order to try to reproduce this.
> Dan
>
>
> - Original Message -
>> From: "Nicolas Delhomme"
>> To: "bioC-devel"
>> Sent: Friday, March 27, 2015 11:04:17 AM
>> Sub
to try to reproduce
> > this.
> > Dan
> >
> >
> > ----- Original Message -
> >> From: "Nicolas Delhomme"
> >> To: "bioC-devel"
> >> Sent: Friday, March 27, 2015 11:04:17 AM
> >> Subject: [Bioc-devel] "f
gt; To: "Dan Tenenbaum"
>> Cc: "bioC-devel"
>> Sent: Friday, March 27, 2015 11:12:00 AM
>> Subject: Re: [Bioc-devel] "forceAndCall" is not a SPECIAL function ERROR
>> when using ShortRead readAligned function
>>
>> Easy
--
On 27 Mar 2015, at 19:09, Dan Tenenbaum wrote:
I think we'd need to see your files in order to try to reproduce this.
Dan
- Original Message -
From: "Nicolas Delhomme"
To: "bioC-devel"
Sent: Friday, March 27, 2015 11:04:17 AM
Subject: [Bioc-devel] "
87 Sweden
>> ---
>>
>>> On 27 Mar 2015, at 19:09, Dan Tenenbaum wrote:
>>>
>>> I think we'd need to see your files in order to try to reproduce this.
>>> Dan
>>>
>
