[Bioc-devel] Error when building in command line but not in RStudio

2021-03-25 Thread AJ Kinstlick
Hi all, I'm trying to upgrade a package that uses R and python together with temp files generated by the system. I encounter an error when building via the command line, but can build the package with no errors using RStudio. *Do I need to worry about any command line errors if the package can be

Re: [Bioc-devel] Error when building in command line but not in RStudio

2021-03-25 Thread Hervé Pagès
On 3/25/21 1:50 PM, AJ Kinstlick wrote: Any help on this would be greatly appreciated, but once again I'm not sure it's even necessary if I can just build the package in RStudio and submit it to Bioconductor. That's not how Bioconductor works. With Bioconductor packages you push changes to you

Re: [Bioc-devel] Error when building in command line but not in RStudio

2021-03-25 Thread Hervé Pagès
Thank you, Holly *From:* Bioc-devel on behalf of Hervé Pagès *Sent:* Thursday, March 25, 2021 3:58 PM *To:* AJ Kinstlick ; bioc-devel@r-project.org *Subject:* Re: [Bioc-devel] Error when building in command line but not in RStudio On 3/25/21 1: