No worries at all, and thank you for following up.
Laurent
From: Bioc-devel on behalf of Marcel Ramos
Sent: 10 March 2021 18:39
To: bioc-devel@r-project.org
Subject: Re: [Bioc-devel] bioconductor_docker:devel missing MAE and
GenomeInfoDb
Hi Laurent
a; Laurent Gatto; bioc-devel@r-project.org
> Subject: Re: [Bioc-devel] bioconductor_docker:devel missing MAE and
> GenomeInfoDb
>
> hi,
>
> a possible workaround is to install directly from the repo using the
> syntax "Bioconductor/pkgname" in the call to 'BiocManager:
From: Robert Castelo
Sent: 10 March 2021 15:36
To: Nitesh Turaga; Laurent Gatto; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] bioconductor_docker:devel missing MAE and GenomeInfoDb
hi,
a possible workaround is to install directly from the repo using the
syntax "Bioconductor/pk
hi,
a possible workaround is to install directly from the repo using the
syntax "Bioconductor/pkgname" in the call to 'BiocManager::install()'.
this just worked in my current devel container:
BiocManager::install("Bioconductor/GenomeInfoDb")
while attempting to 'BiocManager::install("GenomeI
Hi Laurent,
Since you are using the devel version of `bioconductor_docker` it's possible
that the packages failed to build on the build system.
For example,
http://bioconductor.org/checkResults/devel/bioc-LATEST/MultiAssayExperiment/ ,
MultiAsssayExperiment failed to build on devel. A better
I am setting up a repo/docker for the coming Bioc2021 workshops, and apparently
packages ‘GenomeInfoDb’, ‘MultiAssayExperiment’ are not available for this
version of R [1] (they indeed fail on devel). Surprisingly, they seemed to be
available earlier in the day - my action failed for a differen
