t; R CMD BiocCheckGitClone
> > R CMD build --keep-empty-dirs --no-resave-data
> >
> > R CMD check --no-vignettes --timings
> >
> > R CMD BiocCheck --build-output-file= --new-package
> >
> >
> >
> >
> > With th
as described in the above link
>
>
> special files are not encouraged and as far as I am aware not allowed.
> Herve who has more experience with the builders may be able to chime in
> further here.
>
>
>
>
>
>
>
> Lor
; > > > The biodb-cache repository contains 63109 files (484MB).
> > > > Those files change regularly, since output of databases change
> > from time
> > > > to time, and also I add new examples, vignettes and tests.
> > > > Thus it is comm
able to
> chime in further here.
>
>
>
>
>
>
>
> Lori Shepherd
> Bioconductor Core Team
> Roswell Park Cancer Institute
> Department of Biostatistics & Bioinformatics
> Elm & Carlton Streets
> Buffalo, New York 14263
>
>
>
Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Pierrick Roger
Sent: Friday, September 13, 2019 2:48 AM
To: Shepherd, Lori
Subject: Re: [Bioc-devel] new package for accessing some chemical and
b
rk 14263
From: Bioc-devel on behalf of Pierrick Roger
Sent: Wednesday, September 11, 2019 5:04 AM
To: bioc-devel@r-project.org
Subject: [Bioc-devel] new package for accessing some chemical and biological
databases
Dear all,
I'd like to submit by package biodb (https://git
Dear all,
I'd like to submit by package biodb (https://github.com/pkrog/biodb) in the
near future.
The aim of this package is to present a unified access to diverse
databases (ChEBI, KEGG databases, Uniprot, ...).
For running examples, building vignettes and running tests, I use a
cache that is s
