Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-11-03 Thread Sokratis Kariotis
--- > *From:* Sokratis Kariotis > *Sent:* Friday, November 3, 2017 7:04:08 AM > *To:* Hervé Pagès > *Cc:* Shepherd, Lori; bioc-devel > *Subject:* Re: [Bioc-devel] Accepted packages can't find each other and > fail build > > Hey all, > > I can see

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-11-03 Thread Shepherd, Lori
Buffalo, New York 14263 From: Sokratis Kariotis Sent: Friday, November 3, 2017 7:04:08 AM To: Herv� Pag�s Cc: Shepherd, Lori; bioc-devel Subject: Re: [Bioc-devel] Accepted packages can't find each other and fail build Hey all, I can see the landing p

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-11-03 Thread Sokratis Kariotis
>>> Lori Shepherd >>> >>> Bioconductor Core Team >>> >>> Roswell Park Cancer Institute >>> >>> Department of Biostatistics & Bioinformatics >>> >>> Elm & Carlton Streets >>> >>>

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-11-01 Thread Hervé Pagès
gt;> *Sent:* Tuesday, October 31, 2017 11:20:39 AM *To:* Shepherd, Lori *Cc:* Hervé Pagès; Obenchain, Valerie; bioc-devel *Subject:* Re: [Bioc-devel] Accepted packages can't find each other and fail build Does the same hold for the pcxnData package? I can't see

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-11-01 Thread Hervé Pagès
Pagès; Obenchain, Valerie; bioc-devel *Subject:* Re: [Bioc-devel] Accepted packages can't find each other and fail build Does the same hold for the pcxnData package? I can't see the RELEASE_3_6 as in pcxn. -Sokratis On 31 October 2017 at 11:38, Shepherd, Lori

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-11-01 Thread Sokratis Kariotis
ew York 14263 > -- > *From:* Sokratis Kariotis > *Sent:* Tuesday, October 31, 2017 11:20:39 AM > *To:* Shepherd, Lori > *Cc:* Hervé Pagès; Obenchain, Valerie; bioc-devel > > *Subject:* Re: [Bioc-devel] Accepted packages can't find each other an

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-31 Thread Shepherd, Lori
rk 14263 From: Sokratis Kariotis Sent: Tuesday, October 31, 2017 11:20:39 AM To: Shepherd, Lori Cc: Herv� Pag�s; Obenchain, Valerie; bioc-devel Subject: Re: [Bioc-devel] Accepted packages can't find each other and fail build Does the same hold for the pcxnData package? I can't s

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-31 Thread Sokratis Kariotis
- > *From:* Sokratis Kariotis > *Sent:* Tuesday, October 31, 2017 5:21:21 AM > *To:* Hervé Pagès > *Cc:* Obenchain, Valerie; Shepherd, Lori; bioc-devel > *Subject:* Re: [Bioc-devel] Accepted packages can't find each other and > fail build > > Hi all, > > There was

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-31 Thread Shepherd, Lori
rk 14263 From: Sokratis Kariotis Sent: Tuesday, October 31, 2017 5:21:21 AM To: Herv� Pag�s Cc: Obenchain, Valerie; Shepherd, Lori; bioc-devel Subject: Re: [Bioc-devel] Accepted packages can't find each other and fail build Hi all, There was an error in the pcxn package (and pcxnDa

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-31 Thread Sokratis Kariotis
Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> >> From: Bioc-devel > bioc-devel-boun...@r-project.org> on behalf

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-27 Thread Hervé Pagès
lf of Sokratis Kariotis <mailto:s.kario...@sheffield.ac.uk> Sent: Thursday, October 26, 2017 4:02:53 AM To: bioc-devel Subject: [Bioc-devel] Accepted packages can't find each other and fail build Hey all, I created 2 packages that got accepted (pcxn and pcxnData) where pcxn depends on the

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-27 Thread Obenchain, Valerie
on behalf of Sokratis Kariotis <mailto:s.kario...@sheffield.ac.uk> Sent: Thursday, October 26, 2017 4:02:53 AM To: bioc-devel Subject: [Bioc-devel] Accepted packages can't find each other and fail build Hey all, I created 2 packages that got accepted (pcxn and pcxnData) where pcxn depends on the data

Re: [Bioc-devel] Accepted packages can't find each other and fail build

2017-10-26 Thread Shepherd, Lori
ent: Thursday, October 26, 2017 4:02:53 AM To: bioc-devel Subject: [Bioc-devel] Accepted packages can't find each other and fail build Hey all, I created 2 packages that got accepted (pcxn and pcxnData) where pcxn depends on the data coming from pcxnData. However, in the vignettes of pcxnData

[Bioc-devel] Accepted packages can't find each other and fail build

2017-10-26 Thread Sokratis Kariotis
Hey all, I created 2 packages that got accepted (pcxn and pcxnData) where pcxn depends on the data coming from pcxnData. However, in the vignettes of pcxnData I am using library(pcxn) to demonstrate what can you do with the data. As a result both packages fail building in BioC 3.6 as they can't fi