[Bioc-devel] Biostrings: XStringViews subsetting operator does not reduce element metadata

2013-02-21 Thread Jiří Hon
Hi, I found out, that XStringViews/Views subsetting operator does not reduce element metadata as I would expect. See the following example. It is reproducible in both stable (2.11) and development (2.12) versions of Bioconductor.

Re: [Bioc-devel] Biostrings: XStringViews subsetting operator does not reduce element metadata

2013-02-21 Thread Hervé Pagès
Hi Jirka, Clearly a bug. Thanks for the catch! The regression was introduced a couple of years ago when the definition of the Views class was modified. Should be fixed in IRanges release (1.16.6) and devel (1.17.34). Both should become available via biocLite() in the next 24 hours or so. FWIW