[Bioc-devel] Build error for DESeq2 dev causing error in other package builds

2015-04-03 Thread Andrea Rau
Hello, I am the maintainer of a Bioconductor package called 'HTSFilter' that imports DESeq2. On today's build report, I see that my package (as well as DESeq2 and all of the other packages that import it) is showing an error message which seems to arise from a recent change in the DESeq2 code

Re: [Bioc-devel] Build error for DESeq2 dev causing error in other package builds

2015-04-03 Thread Michael Love
hi Andrea, I sent out an email to bioc-devel at the same time as you :) https://stat.ethz.ch/pipermail/bioc-devel/2015-April/007269.html I think this might be fixed already, but I didn't have time to try out GenomicRanges 1.19.51 yet. I will try soon, and if this doesn't fix it, I have a hack

Re: [Bioc-devel] Build error for DESeq2 dev causing error in other package builds

2015-04-03 Thread Martin Morgan
On 04/03/2015 04:37 AM, Andrea Rau wrote: Hello, I am the maintainer of a Bioconductor package called 'HTSFilter' that imports DESeq2. On today's build report, I see that my package (as well as DESeq2 and all of the other packages that import it) is showing an error message which seems to arise