Martin, thanks a lot and thanks too for the details and the workaround for
packageDescription.
best,
R.
On Tue, 30-08-2016, at 00:17, Martin Morgan
wrote:
> On 08/29/2016 05:40 PM, Ramon Diaz-Uriarte wrote:
>>
>> Dear All,
>>
>> At least for some packages
>> (http://bioconductor.org/packages/
Hi Leo,
On Mon, 29-08-2016, at 23:48, Leonardo Collado Torres wrote:
> Hi Ramon,
>
> I also noticed this earlier
> https://stat.ethz.ch/pipermail/bioc-devel/2016-August/009640.html and
> Martin said that they are working on fixing it.
>
Ooops, yes, I was aware of it (thus the "still" in the mes
I see.
> As a developer I would choose to write my CITATION file in a way that did
not require the package to be installed.
I agree. I would suggest then to include this into BiocCheck, so that a
warning or at least a note could be generated, when citation is not working
properly.
--
Alexey
On T
On 08/30/2016 06:56 AM, Alexey Sergushichev wrote:
Martin,
Won't it be easier to include actually installation for each package in
the build script, but into a separate temp folder? Thus every package
will be isntalled and citation() should work fine.
installation is computationally costly and
Martin,
Won't it be easier to include actually installation for each package in the
build script, but into a separate temp folder? Thus every package will be
isntalled and citation() should work fine.
Best,
Alexey
On Tue, Aug 30, 2016 at 1:17 AM, Martin Morgan <
martin.mor...@roswellpark.org> wr
On 08/29/2016 05:40 PM, Ramon Diaz-Uriarte wrote:
Dear All,
At least for some packages
(http://bioconductor.org/packages/devel/bioc/html/OncoSimulR.html) the
citation info is still not displayed correctly. I double checked installing
from BioC just now, and the citation is not the one shown in
Hi Ramon,
I also noticed this earlier
https://stat.ethz.ch/pipermail/bioc-devel/2016-August/009640.html and
Martin said that they are working on fixing it.
Best,
Leo
On Mon, Aug 29, 2016 at 5:40 PM, Ramon Diaz-Uriarte wrote:
>
> Dear All,
>
> At least for some packages
> (http://bioconductor.or
Dear All,
At least for some packages
(http://bioconductor.org/packages/devel/bioc/html/OncoSimulR.html) the
citation info is still not displayed correctly. I double checked installing
from BioC just now, and the citation is not the one shown in the landing
page on BioC; the vignette
(http://www.