Although I didn't make any changes to my package openPrimeR, it is
currently not passing the checks on tokay1 due to the following error
while running the examples:
* checking examples ...
** running examples for arch 'i386' ...Warning in file(con, "r") :
cannot open file '../openPrimeR-Ex_i3
Hi Matthias,
Not sure what's causing this but I just wanted to mention a couple
of things:
Even though you didn't modify your package, it can start failing
for many reasons. The most common reason is that R or another package
that your package depends on was modified. It turns out that a few
day
Dear Hervé,
thanks for the detailed explanation. I have, however, one question.
Isn't this rather a problem with the Bioconductor build system than with
the package itself? I will explain why I think so.
From my limited understanding, it seems to me that the out file from
running the package ex
The build system captures the output of the 'R CMD check' command
and displays it. If you look at the devel build report you'll
see that it also displays the content of some of the files produced
by 'R CMD check':
- openPrimeR.Rcheck/00install.out
- openPrimeR.Rcheck/tests_i386/testthat.Rout
FWIW the build report for BioC release got updated about 2h ago
with today's results and we don't see this CHECK error for
openPrimeR anymore:
https://bioconductor.org/checkResults/3.6/bioc-LATEST/openPrimeR/tokay1-checksrc.html
This is typical with race conditions: some days we'll see the erro
