Re: [Bioc-devel] Flexibility for submitting a new ExperimentData-package

2022-11-28 Thread Marcel Ramos
Hi Teemu Daniel, Those packages were developed before ExperimentHub. Please follow the current standard for experiment data packages at https://bioconductor.org/packages/release/bioc/vignettes/ExperimentHub/inst/doc/ExperimentHub.html You may want to take a look at curatedTCGAData as an

Re: [Bioc-devel] Flexibility for submitting a new ExperimentData-package

2022-11-28 Thread Marcel Ramos
Hi Teemu Daniel, Those packages were developed before ExperimentHub. Please follow the current standard for experiment data packages at https://bioconductor.org/packages/release/bioc/vignettes/ExperimentHub/inst/doc/ExperimentHub.html You may want to take a look at curatedTCGAData as an

Re: [Bioc-devel] Flexibility for submitting a new ExperimentData-package

2022-11-28 Thread Vincent Carey
Thank you for this note. We cannot modify the system to accept this package. If we can help with aspects of compatibility problems related to ExperimentHub let us know. On Thu, Nov 24, 2022 at 1:58 AM Daniel Laajala wrote: > Dear Bioconductor devs, > > thanks for all the hard work. Regarding

[Bioc-devel] Flexibility for submitting a new ExperimentData-package

2022-11-23 Thread Daniel Laajala
Dear Bioconductor devs, thanks for all the hard work. Regarding if there's any leeway in how ExperimentData-packages are structured: We started working a few years back on a "curatedPCaData" R-package for curating prostate cancer multi-'omics datasets. We followed the structure of a family of