[Bioc-devel] KEGG REST issue

2015-09-23 Thread Luo Weijun via Bioc-devel
Dear BioC team, I noticed some problem with keggLink() function of KEGGREST package, and it can be traced back to KEGG REST API Linked entries. Some of this API function is broken. For example, the following line used to get all gene-pathway mapping for human, but retrieves nothing now. path.hsa

Re: [Bioc-devel] KEGG REST issue

2015-09-23 Thread Dan Tenenbaum
Hi Weijun, - Original Message - > From: "Luo Weijun" > To: maintai...@bioconductor.org, dtene...@fredhutch.org > Cc: "Martin Morgan" , Bioc-devel@r-project.org > Sent: Wednesday, September 23, 2015 9:44:13 AM > Subject: KEGG REST issue > > Dear BioC team, > I noticed some problem with ke