If it is the .git pack that is the problem, you can keep it out of the
tarball by creating a file in the main package directory (where
DESCRIPTION lives) called ",Rbuildignore". Put a line in that file that
reads
\.git/(.*)
That will keep anything in the .git folder from being included.
On
Hi Gabriel,
You can find how to use BFG and other related recommendations at the R
devel book:
https://contributions.bioconductor.org/git-version-control.html?q=BFG#removing-large-files-from-history-with-bfg-repo-cleaner
I hope this helps with this and other questions,
Lluís
On Fri, 29 Mar
Hi,
I am not part of the core Bioconductor team, but I have been in this
situation before. I would suggest you use the BFG Repo Cleaner (
https://rtyley.github.io/bfg-repo-cleaner/) to remove the errant bam file
from your repo's history. It's very likely that adding and removing the bam
file means
Hi!
This is my first message to the mailing list so apologies if I am breaking any
guidelines.
I am submitting a package called Ribostan and the build report gives an error
that the package tarball exceeds the size requirement. I am also being warned
that individual package files exceed the
nt: Friday, April 26, 2019 11:04 PM
To: Boris Steipe; Jianhai Zhang
Cc: bioc-devel
Subject: Re: [Bioc-devel] package size issue
Interesting observation Boris.
The software packages currently have 1261 pdf vignettes and 983 html
vignettes in BioC 3.9. Here are some q
Interesting observation Boris.
The software packages currently have 1261 pdf vignettes and 983 html
vignettes in BioC 3.9. Here are some quick stats that confirm Boris'
observation (sizes are in bytes):
> summary(pdf.sizes)
Min. 1st Qu. Median Mean 3rd Qu. Max.
5267
I've recently been struggling with this and found to my surprise that even
basically empty HTML vignettes are 1Mb in size due to the extensive Javascript
they contain. PDF vignettes are much smaller.
Perhaps this helps.
Cheers,
Boris
> On 2019-04-26, at 17:44, Jianhai Zhang wrote:
>
>
