for your availability.
All the best,
Daniele
From: Martin Morgan
Sent: 24 March 2020 19:00
To: Daniele Muraro; bioc-devel@r-project.org
Subject: Re: [Bioc-devel] Python dependency [EXT]
It's important to ask 'why Bioconductor?' with the answer partly involving
It's important to ask 'why Bioconductor?' with the answer partly involving
interoperability with other Bioconductor packages and data representations
(e.g., http://bioconductor.org/developers/how-to/commonMethodsAndClasses/).
There wouldn't be much value in making something that is essentially
Hi,
Yes Bioconductor packages can depend on Python modules. This should only
happen behind the scene and be transparent to the end user (i.e. the end
user is not expected to interact directly with the Python module).
You can use reticulate (from CRAN) directly or, even better, use
basilisk
To whom it may concern,
I would like to upload onto Bioconductor a package which is currently developed
in python.
I was wondering if Bioconductor supports python dependencies or if I should
re-program the package in R exclusively. Is calling python from R using the
package "reticulate"
