Re: [Bioc-devel] R package on Github uses Bioconductor depenencies and cant be installed.

2024-02-28 Thread Vincent Carey
What command was used? BiocManager::install should resolve the dependencies whereas straight use of install.packages would not. On Wed, Feb 28, 2024 at 9:07 AM Ruff, Sergej wrote: > Hello, > > > I have an R package on Github that uses Bioconductor dependencies: > > >

Re: [Bioc-devel] R package on Github uses Bioconductor depenencies and cant be installed.

2024-02-28 Thread Kern, Lori via Bioc-devel
Bioconductor packages need to be installed with BiocManager. If you do BiocManager::install("klausjung-hannover/bootGSEA") That should also find Bioconductor package dependencies. Lori Shepherd - Kern Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of

[Bioc-devel] R package on Github uses Bioconductor depenencies and cant be installed.

2024-02-28 Thread Ruff, Sergej
Hello, I have an R package on Github that uses Bioconductor dependencies: https://github.com/klausjung-hannover/bootGSEA/blob/main/DESCRIPTION One reviewer recently sent me a message that he can�t install the package. Itried installing the package on a new device and got the following